Good day
I am in the same position as you. To scared to stray far from the list of the Blackmagic certified boards but also hesitant to drop the money on old hardware.
From my research, what you prob want is a MB that can run 2 or 3 GPU's at x16 lane speed. Most MB's divide the lane speed as you populate them. So the first slot runs at x16 the second at x8 and the 3rd x4. Sometimes better, sometimes worse.
I have found an Asus card that can run 4 GPU's at x16 speed. Here is the link:
http://www.asus.com/us/Motherboards/P9X ... ificationsThis card also seems like its part of the family of the P9X79 Pro, which is a supported card.
So, I will run a GPU Card for the GUI, a GPU card for the processing and a Decklink 4K card. All will run at x16 speed, PCI gen3.
It also has the 2011 chipset. It does not have thunderbolt, which is a bummer!
So by association it "should" work... I might purchase this card soon and try it out.
I hope this helps a bit