Question on handling power windows & tracking

Hi,
I've looked into this on the forum and manual, but still not sure on how to handle the following:
Say I drawn a polygon window on a part of the footage and tracked it.
But during the shot the window, for a few frames, is covered by something in front of it in the shot.
Due to this you have to tweak the window, or you cannot properly color correct it.
So..
- Can I animate the polygon points after tracking for the offending frames? I cannot seem to find this..
- Or do I have too create a second polygon window, track that too and subtract it from the first?
Just looking into the best workflow part of things here, still new to all this
rob
I've looked into this on the forum and manual, but still not sure on how to handle the following:
Say I drawn a polygon window on a part of the footage and tracked it.
But during the shot the window, for a few frames, is covered by something in front of it in the shot.
Due to this you have to tweak the window, or you cannot properly color correct it.
So..
- Can I animate the polygon points after tracking for the offending frames? I cannot seem to find this..
- Or do I have too create a second polygon window, track that too and subtract it from the first?
Just looking into the best workflow part of things here, still new to all this

rob